insitucnv.pl.plotting

Functions

plot_chromosome_heatmap(adata, groupby[, ...])

Plot and optionally save an infercnvpy chromosome heatmap.

plot_cluster_composition(adata, cluster_key, ...)

Plot annotation proportions for each CNV cluster.

plot_cnv_outputs(adata, cluster_keys, output_dir)

Save heatmap and spatial plots for one or more CNV cluster keys.

plot_spatial(adata, color[, output_path, ...])

Plot spatial coordinates colored by an adata.obs column.